Oleg Dzhimiev committed changes to the Elphel git project :
fixed hardcoded paths

Oleg Dzhimiev committed changes to the Elphel git project :
1. pass zooom and lat;lng from index to viewer and back 2. center on dblclick, no center on click 3. minor error fix

Andrey Filippov committed changes to the Elphel git project :
debug output

Andrey Filippov committed changes to the Elphel git project :
disable some debug print that caused errors in multithreaded mode

AndreyFilippov committed changes to the Elphel git project :
detecting periodic features (unfinished)

Andrey Filippov committed changes to the Elphel git project :
fixed problem with rig adjustment when the same tile is measured with NaN

AndreyFilippov committed changes to the Elphel git project :
detecting periodic by a single camera

‎TIFF stacks for ML

← Older revision Revision as of 20:13, 13 July 2018 (2 intermediate revisions by the same user not shown)Line 45: Line 45:     ==<font color='ForestGreen'>TIFF stacks for ML</font>== ==<font color='ForestGreen'>TIFF stacks for ML</font>== −[[File:Ml tiff stack imagej.jpeg|thumb|400px|Fig.1 Opened in ImageJ]]+[[File:Ml tiff stack imagej.jpeg|thumb|400px|Fig.1 Opened in ImageJ, one of the layers]]  [[File:Ml tiff stack python values.jpeg|thumb|800px|Fig.2 Decoded 'value'-layers]] [[File:Ml tiff stack python values.jpeg|thumb|800px|Fig.2 Decoded 'value'-layers]]  [[File:Ml tiff stack python data layers.jpeg|thumb|500px|Fig.3 Data layers]] [[File:Ml tiff stack python data layers.jpeg|thumb|500px|Fig.3 Data layers]] Line 54: Line 54:  *** '''hor-pairs''' *** '''hor-pairs'''  *** '''vert-pairs''' *** '''vert-pairs''' −*** '''other''' - encoded values: estimated disparity, residual disparity and confidence for the residual disparity+*** '''other''' - encoded values: estimated disparity, estimated+residual disparity, and confidence for the residual disparity  * The source files are processed using a plugin for ImageJ, the output file for each set is a tiff stack * The source files are processed using a plugin for ImageJ, the output file for each set is a tiff stack  * There are a few ways to view the stack: * There are a few ways to view the stack: Oleg

Oleg Dzhimiev committed changes to the Elphel git project :
minor changes

Oleg Dzhimiev committed changes to the Elphel git project :
1. packing type 2 2. epochs, batches changes

← Older revision Revision as of 19:19, 13 July 2018 (One intermediate revision by the same user not shown)Line 45: Line 45:     ==<font color='ForestGreen'>TIFF stacks for ML</font>== ==<font color='ForestGreen'>TIFF stacks for ML</font>== −[[File:Ml tiff stack imagej.jpeg|thumb|400px|Fig.1 Opened in ImageJ]]+[[File:Ml tiff stack imagej.jpeg|thumb|400px|Fig.1 Opened in ImageJ, one of the layers]]  [[File:Ml tiff stack python values.jpeg|thumb|800px|Fig.2 Decoded 'value'-layers]] [[File:Ml tiff stack python values.jpeg|thumb|800px|Fig.2 Decoded 'value'-layers]]  [[File:Ml tiff stack python data layers.jpeg|thumb|500px|Fig.3 Data layers]] [[File:Ml tiff stack python data layers.jpeg|thumb|500px|Fig.3 Data layers]] Oleg

Oleg uploaded a new version of File:Ml tiff stack imagej.jpeg

New page

== Licensing ==
{{CC }} Oleg

Oleg Dzhimiev committed changes to the Elphel git project :
testing

‎Python

← Older revision Revision as of 00:49, 13 July 2018 Line 110: Line 110:    values data: (242, 324, 3)</font>   values data: (242, 324, 3)</font>    −[[File:Ml tiff stack python tile packing.jpeg|thumb|400px|Fig.4 Single layer packing]]+[[File:Ml tiff stack python tile packing.jpeg|thumb|400px|Fig.4 Single layer packing (actually, see the CVPR2018 presentation, p.23)]]  '''2.''' Use '''pack_tile.py''' from [https://git.elphel.com/Elphel/python3-imagej-tiff python3-imagej-tiff] to: '''2.''' Use '''pack_tile.py''' from [https://git.elphel.com/Elphel/python3-imagej-tiff python3-imagej-tiff] to:  * <font color='DarkGreen'>'''Pack image tiles for better structuring for ML'''</font> * <font color='DarkGreen'>'''Pack image tiles for better structuring for ML'''</font> Oleg

‎Python

← Older revision Revision as of 00:49, 13 July 2018 (One intermediate revision by the same user not shown)Line 110: Line 110:    values data: (242, 324, 3)</font>   values data: (242, 324, 3)</font>    − +[[File:Ml tiff stack python tile packing.jpeg|thumb|400px|Fig.4 Single layer packing (actually, see the CVPR2018 presentation, p.23)]]  '''2.''' Use '''pack_tile.py''' from [https://git.elphel.com/Elphel/python3-imagej-tiff python3-imagej-tiff] to: '''2.''' Use '''pack_tile.py''' from [https://git.elphel.com/Elphel/python3-imagej-tiff python3-imagej-tiff] to:  * <font color='DarkGreen'>'''Pack image tiles for better structuring for ML'''</font> * <font color='DarkGreen'>'''Pack image tiles for better structuring for ML'''</font> Oleg

Oleg Dzhimiev committed changes to the Elphel git project :
NaNs are already taken care of

‎Python

← Older revision Revision as of 20:20, 12 July 2018 Line 110: Line 110:    values data: (242, 324, 3)</font>   values data: (242, 324, 3)</font>    − +[[File:Ml tiff stack python tile packing.jpeg|thumb|400px|Fig.4 Single layer packing]]  '''2.''' Use '''pack_tile.py''' from [https://git.elphel.com/Elphel/python3-imagej-tiff python3-imagej-tiff] to: '''2.''' Use '''pack_tile.py''' from [https://git.elphel.com/Elphel/python3-imagej-tiff python3-imagej-tiff] to:  * <font color='DarkGreen'>'''Pack image tiles for better structuring for ML'''</font> * <font color='DarkGreen'>'''Pack image tiles for better structuring for ML'''</font> Oleg

Oleg uploaded File:Ml tiff stack python tile packing.jpeg

New page

== Licensing ==
{{CC }} Oleg

Oleg uploaded a new version of File:Ml tiff stack python values.jpeg

New page

== Licensing ==
{{CC }} Oleg

← Older revision Revision as of 20:08, 12 July 2018 (2 intermediate revisions by the same user not shown)Line 60: Line 60:  ImageJ - it has a native support for stacks, each stack has a name label stored (along with related xml info) in the ImageJ tiff tags. To read tiff tags in ImageJ, go '''Image > Show Info...''' ImageJ - it has a native support for stacks, each stack has a name label stored (along with related xml info) in the ImageJ tiff tags. To read tiff tags in ImageJ, go '''Image > Show Info...'''  ====Python==== ====Python==== −Use '''imagej_tiff.py''' from [https://git.elphel.com/Elphel/python3-imagej-tiff python3-imagej-tiff] to:+'''1.''' Use '''imagej_tiff.py''' from [https://git.elphel.com/Elphel/python3-imagej-tiff python3-imagej-tiff] to:  * <font color='DarkGreen'>'''Get tiff tags values (Pillow)'''</font> * <font color='DarkGreen'>'''Get tiff tags values (Pillow)'''</font>  * <font color='DarkGreen'>'''Parse Properties xml data stored by ImageJ in the tiff tags'''</font> * <font color='DarkGreen'>'''Parse Properties xml data stored by ImageJ in the tiff tags'''</font> Line 109: Line 109:    image data:  (242, 324, 9, 9, 4)   image data:  (242, 324, 9, 9, 4)    values data: (242, 324, 3)</font>   values data: (242, 324, 3)</font>  +  +  +'''2.''' Use '''pack_tile.py''' from [https://git.elphel.com/Elphel/python3-imagej-tiff python3-imagej-tiff] to:  +* <font color='DarkGreen'>'''Pack image tiles for better structuring for ML'''</font>  + <font size=2>'''# The current packing is hardcoded in the script: (TY,TX,9,9,4) -> (TY,TX,100)'''  + # Get tiles from a tiff stack  + import pack_tile as pile  + packed_tiles = pile.pack(tile)  + # packed_tiles get stacked with '''estimated disparity''' (see '''test_nn_feed.py''')  + packed_tiles = np.dstack((packed_tiles,values[:,:,0])) Oleg