Andrey Filippov committed changes to the Elphel git project :
Update README.md

Andrey Filippov committed changes to the Elphel git project :
Update README.md

Andrey Filippov committed changes to the Elphel git project :
Update README.md

Andrey Filippov committed changes to the Elphel git project :
Update README.md

AndreyFilippov committed changes to the Elphel git project :
Changed TopModule<s> generators to use tool's top file if available

AndreyFilippov committed changes to the Elphel git project :
reverted accidental debug

AndreyFilippov committed changes to the Elphel git project :
Changed TopModule<s> generators to use tool's top file if available

Andrey Filippov committed changes to the Elphel git project :
Merge branch 'master' of github.com:Elphel/x393

Andrey Filippov committed changes to the Elphel git project :
generated bitstream for parallel interface sensors

AndreyFilippov committed changes to the Elphel git project :
Merge branch 'master' of https://github.com/Elphel/x393

AndreyFilippov committed changes to the Elphel git project :
minor formatting

Andrey Filippov committed changes to the Elphel git project :
removed duplicate line

Requirements:

← Older revision Revision as of 20:06, 16 June 2016 (3 intermediate revisions not shown)Line 15: Line 15: * [http://php.net/ PHP] * [http://php.net/ PHP] * Get calibration kernels for the current Eyesis4Pi (come on a HDD with a camera).<!--Example kernels and sensor files can be found [http://eyesisbox.elphel.com/post-processing/calibration/ here]('''~78GB''', download everything).--> * Get calibration kernels for the current Eyesis4Pi (come on a HDD with a camera).<!--Example kernels and sensor files can be found [http://eyesisbox.elphel.com/post-processing/calibration/ here]('''~78GB''', download everything).--> -* Get default-config.corr-xml (HDD).<!--from the same [http://eyesisbox.elphel.com/post-processing/calibration/ location].-->+* Get default-config.corr-xml (come on a HDD with a camera).<!--from the same [http://eyesisbox.elphel.com/post-processing/calibration/ location].--> * Download footage from the camera.<!--Download footage samples from [http://eyesisbox.elphel.com/post-processing/post-processing/src/ here].--> * Download footage from the camera.<!--Download footage samples from [http://eyesisbox.elphel.com/post-processing/post-processing/src/ here].-->  +<!-- * '''Processed''' files are available for downloading from [http://eyesisbox.elphel.com/post-processing/post-processing/imagej_processed/ here] (ready for the stitching step). * '''Processed''' files are available for downloading from [http://eyesisbox.elphel.com/post-processing/post-processing/imagej_processed/ here] (ready for the stitching step). * '''Stitched''' results are found [http://eyesisbox.elphel.com/post-processing/post-processing/results/ here]. * '''Stitched''' results are found [http://eyesisbox.elphel.com/post-processing/post-processing/results/ here].  +--> ==Instructions== ==Instructions== -* Open terminal window:+* Launch ImageJ from Eclipse <font size='2'> <font size='2'> - cd /data/ImageJ  - ./run  * Go to '''Plugins''' -> '''ImageJ-Elphel''' -> '''Eyesis Correction''' * Go to '''Plugins''' -> '''ImageJ-Elphel''' -> '''Eyesis Correction'''   '''Note''': if plugin needs to be recompiled - '''Plugins''' -> '''Compile & Run'''. Find and select '''Eyesis_Correction.java'''.   '''Note''': if plugin needs to be recompiled - '''Plugins''' -> '''Compile & Run'''. Find and select '''Eyesis_Correction.java'''. Line 55: Line 55: * After processing is done there is only the blending step. It can be launched manually or from the WebGUI: * After processing is done there is only the blending step. It can be launched manually or from the WebGUI: **[[Eyesis4Pi_Footage_Procedures_page#Step_3|WebGUI]] **[[Eyesis4Pi_Footage_Procedures_page#Step_3|WebGUI]] -**Manual blending: [http://eyesisbox.elphel.com/post-processing/post-processing/stitch.php the following script] scans directory for *.tiffs from ImageJ and uses '''enblend'''(to stitch into 16-bit tiffs) and converts them into jpegs, in terminal:+**Manual blending: [http://community.elphel.com/files/eyesis4pi/post-processing/stitch.php the following script] scans directory for *.tiffs from ImageJ and uses '''enblend'''(to stitch into 16-bit tiffs) and converts them into jpegs, in terminal: <font size='2'> <font size='2'>   php stitch.php [source_directory] [destination_directory]   php stitch.php [source_directory] [destination_directory] Oleg

Instructions:

← Older revision Revision as of 19:39, 16 June 2016 (2 intermediate revisions not shown)Line 17: Line 17: * Get default-config.corr-xml (HDD).<!--from the same [http://eyesisbox.elphel.com/post-processing/calibration/ location].--> * Get default-config.corr-xml (HDD).<!--from the same [http://eyesisbox.elphel.com/post-processing/calibration/ location].--> * Download footage from the camera.<!--Download footage samples from [http://eyesisbox.elphel.com/post-processing/post-processing/src/ here].--> * Download footage from the camera.<!--Download footage samples from [http://eyesisbox.elphel.com/post-processing/post-processing/src/ here].-->  +<!-- * '''Processed''' files are available for downloading from [http://eyesisbox.elphel.com/post-processing/post-processing/imagej_processed/ here] (ready for the stitching step). * '''Processed''' files are available for downloading from [http://eyesisbox.elphel.com/post-processing/post-processing/imagej_processed/ here] (ready for the stitching step). * '''Stitched''' results are found [http://eyesisbox.elphel.com/post-processing/post-processing/results/ here]. * '''Stitched''' results are found [http://eyesisbox.elphel.com/post-processing/post-processing/results/ here].  +--> ==Instructions== ==Instructions== -* Open terminal window:+* Launch ImageJ from Eclipse <font size='2'> <font size='2'> - cd /data/ImageJ  - ./run  * Go to '''Plugins''' -> '''ImageJ-Elphel''' -> '''Eyesis Correction''' * Go to '''Plugins''' -> '''ImageJ-Elphel''' -> '''Eyesis Correction'''   '''Note''': if plugin needs to be recompiled - '''Plugins''' -> '''Compile & Run'''. Find and select '''Eyesis_Correction.java'''.   '''Note''': if plugin needs to be recompiled - '''Plugins''' -> '''Compile & Run'''. Find and select '''Eyesis_Correction.java'''. Line 55: Line 55: * After processing is done there is only the blending step. It can be launched manually or from the WebGUI: * After processing is done there is only the blending step. It can be launched manually or from the WebGUI: **[[Eyesis4Pi_Footage_Procedures_page#Step_3|WebGUI]] **[[Eyesis4Pi_Footage_Procedures_page#Step_3|WebGUI]] -**Manual blending: [http://eyesisbox.elphel.com/post-processing/post-processing/stitch.php the following script] scans directory for *.tiffs from ImageJ and uses '''enblend'''(to stitch into 16-bit tiffs) and converts them into jpegs, in terminal:+**Manual blending: [http://community.elphel.com/files/eyesis4pi/post-processing/stitch.php the following script] scans directory for *.tiffs from ImageJ and uses '''enblend'''(to stitch into 16-bit tiffs) and converts them into jpegs, in terminal: <font size='2'> <font size='2'>   php stitch.php [source_directory] [destination_directory]   php stitch.php [source_directory] [destination_directory] Oleg

Instructions:

← Older revision Revision as of 19:33, 16 June 2016 (One intermediate revision not shown)Line 19: Line 19: ==Instructions== ==Instructions== -* launch ImageJ from Eclipse+* Launch ImageJ from Eclipse * Go to '''Plugins''' -> '''ImageJ-Elphel''' -> '''Eyesis Correction''' * Go to '''Plugins''' -> '''ImageJ-Elphel''' -> '''Eyesis Correction'''   '''Note''': if plugin needs to be recompiled - '''Plugins''' -> '''Compile & Run'''. Find and select '''Eyesis_Correction.java'''.   '''Note''': if plugin needs to be recompiled - '''Plugins''' -> '''Compile & Run'''. Find and select '''Eyesis_Correction.java'''. -</font>+  {| {| |- valign="top" |- valign="top" Oleg

Requirements:

← Older revision Revision as of 19:31, 16 June 2016 (One intermediate revision not shown)Line 10: Line 10: ==Requirements== ==Requirements== * Linux OS (Kubuntu preferably). * Linux OS (Kubuntu preferably). -* [[Elphel_Software_Kit_for_Ubuntu#ImageJ_and_Elphel_plugins_for_imageJ|Elphel ImageJ Plugins]].+* [[Elphel_Software_Kit_for_Ubuntu#ImageJ_and_Elphel_plugins_for_imageJ|Elphel ImageJ plugins]]. * Locate calibration kernels for the current camera. * Locate calibration kernels for the current camera. * Locate ''default-config.corr-xml''. * Locate ''default-config.corr-xml''. ==Instructions== ==Instructions== -* Launch ImageJ from Eclipse:+* Launch ImageJ from Eclipse * Go to '''Plugins''' -> '''ImageJ-Elphel''' -> '''Eyesis Correction''' * Go to '''Plugins''' -> '''ImageJ-Elphel''' -> '''Eyesis Correction''' {| {| Oleg

Instructions:

← Older revision Revision as of 19:30, 16 June 2016 (One intermediate revision not shown)Line 10: Line 10: ==Requirements== ==Requirements== * Linux OS (Kubuntu preferably). * Linux OS (Kubuntu preferably). -* [http://rsbweb.nih.gov/ij/download.html ImageJ].+* [[Elphel_Software_Kit_for_Ubuntu#ImageJ_and_Elphel_plugins_for_imageJ|ImageJ and Elphel plugins]]. -* [[Elphel_Software_Kit_for_Ubuntu#ImageJ_and_Elphel_plugins_for_imageJ|Elphel ImageJ Plugins]].+ <!-- <!-- * Place [http://eyesisbox.elphel.com/post-processing/ImageJ/plugins/loci_tools.jar loci_tools.jar] into '''ImageJ/plugins/'''. * Place [http://eyesisbox.elphel.com/post-processing/ImageJ/plugins/loci_tools.jar loci_tools.jar] into '''ImageJ/plugins/'''. Line 20: Line 19: ==Instructions== ==Instructions== -* Open terminal window:+* launch ImageJ from Eclipse -<font size='2'>+ - cd /data/ImageJ+ - ./run+ * Go to '''Plugins''' -> '''ImageJ-Elphel''' -> '''Eyesis Correction''' * Go to '''Plugins''' -> '''ImageJ-Elphel''' -> '''Eyesis Correction'''   '''Note''': if plugin needs to be recompiled - '''Plugins''' -> '''Compile & Run'''. Find and select '''Eyesis_Correction.java'''.   '''Note''': if plugin needs to be recompiled - '''Plugins''' -> '''Compile & Run'''. Find and select '''Eyesis_Correction.java'''. Oleg

ImageJ and Elphel plugins for imageJ:

← Older revision Revision as of 19:27, 16 June 2016 (One intermediate revision not shown)Line 294: Line 294:           2. Create Run Configuration:   2. Create Run Configuration: -     a. Run Configurations -> select Java Application -> New Launch Configuration -> Search for Aberration_Calibration class and select it -> Run+     a. Run Configurations -> select Java Application -> New Launch Configuration -> find the needed plugin class -> Run  +        Classes:  +        * '''Aberration_Calibration''' - work with calibration data, regenerate kernels, etc.  +        * '''Eyesis_correction''' - postprocess images.      b. It will launch ''ImageJ & Aberration_Calibration plugin''      b. It will launch ''ImageJ & Aberration_Calibration plugin''      c. Other plugins are launched from ImageJ window from Plugins      c. Other plugins are launched from ImageJ window from Plugins Oleg

Requirements:

← Older revision Revision as of 19:22, 16 June 2016 Line 10: Line 10: ==Requirements== ==Requirements== * Linux OS (Kubuntu preferably). * Linux OS (Kubuntu preferably). -* [http://rsbweb.nih.gov/ij/download.html ImageJ].+* [[Elphel_Software_Kit_for_Ubuntu#ImageJ_and_Elphel_plugins_for_imageJ|ImageJ and Elphel plugins]]. -* [[Elphel_Software_Kit_for_Ubuntu#ImageJ_and_Elphel_plugins_for_imageJ|Elphel ImageJ Plugins]].+ -* place [http://eyesisbox.elphel.com/post-processing/ImageJ/plugins/loci_tools.jar loci_tools.jar] into '''ImageJ/plugins/'''.+ -* Place [http://eyesisbox.elphel.com/post-processing/ImageJ/plugins/tiff_tags.jar tiff_tags.jar] into '''ImageJ/plugins/'''.+ * [http://hugin.sourceforge.net/ Hugin tools] - ''enblend''. * [http://hugin.sourceforge.net/ Hugin tools] - ''enblend''. * [http://www.imagemagick.org/script/index.php ImageMagick] - ''convert''. * [http://www.imagemagick.org/script/index.php ImageMagick] - ''convert''. Oleg

← Older revision Revision as of 22:04, 15 June 2016 (2 intermediate revisions not shown)Line 1: Line 1: ==Description== ==Description== -* Kernel panic caused by:+* Kernel panic caused by mounting a read only file system as rootfs:   ...   ...   <font size='2' color='red'>VFS: Unable to mount root fs on unknown-block(179,2)</font>   <font size='2' color='red'>VFS: Unable to mount root fs on unknown-block(179,2)</font>   ...   ... -* Used to happen when the camera boots from NAND flash and tries to mount rootfs from uSD card+** In this case it used to happen when the camera was booting from NAND flash and tried to mount rootfs from uSD card detected as '''ro''' for some reason.  +** Also happens anytime the kernel fails to mount rootfs: corrupted card, bad/wrong partitioning, something else - inspect the bootlog.  +  * Some cards worked, some - didn't. * Some cards worked, some - didn't. -* All cards work fine if camera boots from MMC only+* All cards work fine if camera was booting from the that card only. -* Card detected as '''ro'''+ ==Explanation== ==Explanation== -Kernel mounts rootfs from a read only card and this results in kernel panic:  * WP is read from 0xf8000830[5:0] - which is a MIO pin - it pointed to MIO_0, a CD for NAND flash. During the boot from NAND flash the value of the pin was probably changing and some slower cards were detected as read only. * WP is read from 0xf8000830[5:0] - which is a MIO pin - it pointed to MIO_0, a CD for NAND flash. During the boot from NAND flash the value of the pin was probably changing and some slower cards were detected as read only. Line 267: Line 267:   [    7.087153] [<c0052f68>] (cpu_startup_entry) from [<00008704>] (0x8704)   [    7.087153] [<c0052f68>] (cpu_startup_entry) from [<00008704>] (0x8704)   [    7.093749] ---[ end Kernel panic - not syncing: VFS: Unable to mount root fs on unknown-block(179,2)</b></font>   [    7.093749] ---[ end Kernel panic - not syncing: VFS: Unable to mount root fs on unknown-block(179,2)</b></font>  +  +[[Category:393]] Oleg